CDS

Accession Number TCMCG042C21628
gbkey CDS
Protein Id XP_016453764.1
Location join(18614..18744,19462..20164,20677..20868,21768..21973,23862..24102)
Gene LOC107778084
GeneID 107778084
Organism Nicotiana tabacum

Protein

Length 490aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016598278.1
Definition PREDICTED: probable pectate lyase 13 isoform X2 [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category G
Description Amb_all
KEGG_TC -
KEGG_Module -
KEGG_Reaction R02361        [VIEW IN KEGG]
R06240        [VIEW IN KEGG]
KEGG_rclass RC00049        [VIEW IN KEGG]
RC00705        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01728        [VIEW IN KEGG]
EC 4.2.2.2        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00040        [VIEW IN KEGG]
ko02024        [VIEW IN KEGG]
map00040        [VIEW IN KEGG]
map02024        [VIEW IN KEGG]
GOs GO:0002376        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009814        [VIEW IN EMBL-EBI]
GO:0009825        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0016829        [VIEW IN EMBL-EBI]
GO:0016835        [VIEW IN EMBL-EBI]
GO:0016837        [VIEW IN EMBL-EBI]
GO:0030570        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031225        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042545        [VIEW IN EMBL-EBI]
GO:0042547        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0045229        [VIEW IN EMBL-EBI]
GO:0046658        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0071554        [VIEW IN EMBL-EBI]
GO:0071555        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCTTTCTGCTATTTGCATTCTCTTATTCTGTTTCTTAATCTCATTCTTCCCACTAATTACAAATTCCCTTAATCTCACCCTCCCCTATCAACACCCTTACCCTGAAGCTGTGGTTCAAGAACTACAAAGGGTGAATGAGTCCATATCAAGAAGACAACTGTTAGACACTACCATAAATGCACAATGTCAAACAGGGAACCCAATAGACGATTGCTGGCGCTGCGATCCAAACTGGGCCAGCAATCGTCAACGTTTAGCAGATTGCGCCATAGGCTTCGGCCAGGGCACAATCGGAGGAAGAAACGGTAAGATTTACGTCGTCACTGATTCTTCAGATAGAGACACCGTAAATCCAACGCCGGGGACTCTCCGGCATGCCGTAATCCAAGACGAACCGCTCTGGATAATTTTCTCAGCCGACATGTTTATTAAATTAAAACATGAACTCATCGTAAATAGTTATAAAACAATCGACGGTCGTGGTGCAAAAGTACACATTACAGGAAATGGATGTATAACGTTACAATATATTAGTAATGTTATTATACACAATGTGCATATTTACAATTGTCGTCCTTCGGGAAATACTAATATACGTTCGACCCCGACTCACGTTGGACATAGAGGAAGATCGGACGGTGATGGAATTTCTATATTTGGATCGCGAAATATATGGATTGATCATTGTGCATTGTCGCATTGTACCGACGGCTTAATTGATGCTATCATGGGGTCCACTGCGATTACTATATCTAACAACTATTTCACTCACCATGATGAAGTTATGCTCTTGGGACATGATGATAGATATTTGCCTGACTCCGGAATGCAGGTGACAATAGCATTCAATCATTTTGGAGTGGGATTAGTACAGAGAATGCCAAGGTGTAGAAGAGGATATATACATGTAGTGAACAATGATTTTACAGAGTGGCAAATGTATGCAATTGGAGGAAGTGCTAATCCTACTATTAATAGTCAGGGCAATCGTTATATGGCGCCAGTGGATCCAAATGCAAAGGAGGTGACAAAGCGCGTGGACACAGACGAGGGAGAGTGGAGTGACTGGAACTGGAGAACTGATGGGGACGTAATGGTAAATGGAGCATTTTTCGTGCCATCAGGTGAAGGGCTGAGCAACCAATACGCGAAGGCCTCGAGCGTGGAGCCCAAATCCGCTGTTCTTATTGATCAACTCACCCTCAACGCCGGTGTTTTTGGTGGCCCGAGGGATAATAGTATTAGCATATCATATGGAGGTGGGACCACCACCGGAGCTAGCGGGAGCGGCGGTGCCGGGTCCACTGGCGGCGGCGATAGTGACTTCTATGGAATGATATTTGGGAGCGGCGCAAAATTATCACCATCTACAACCACTACTATTTTATTGTCTCATTTAATTATTTTAGTTTTGTACATTACCACCAACCATTGTGGGCAATTATCATTACAATTATTACACTTACTATAG
Protein:  
MLSAICILLFCFLISFFPLITNSLNLTLPYQHPYPEAVVQELQRVNESISRRQLLDTTINAQCQTGNPIDDCWRCDPNWASNRQRLADCAIGFGQGTIGGRNGKIYVVTDSSDRDTVNPTPGTLRHAVIQDEPLWIIFSADMFIKLKHELIVNSYKTIDGRGAKVHITGNGCITLQYISNVIIHNVHIYNCRPSGNTNIRSTPTHVGHRGRSDGDGISIFGSRNIWIDHCALSHCTDGLIDAIMGSTAITISNNYFTHHDEVMLLGHDDRYLPDSGMQVTIAFNHFGVGLVQRMPRCRRGYIHVVNNDFTEWQMYAIGGSANPTINSQGNRYMAPVDPNAKEVTKRVDTDEGEWSDWNWRTDGDVMVNGAFFVPSGEGLSNQYAKASSVEPKSAVLIDQLTLNAGVFGGPRDNSISISYGGGTTTGASGSGGAGSTGGGDSDFYGMIFGSGAKLSPSTTTTILLSHLIILVLYITTNHCGQLSLQLLHLL